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Autocycler: full read sets

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posted on 2025-05-01, 06:30 authored by RYAN WICKRYAN WICK
<p dir="ltr">This archive contains the full ONT and Illumina read sets for each genome included in the Autocycler benchmarking study. ONT reads were basecalled with Dorado v0.9.5 using the sup-v5 model. Basic quality control has been applied: minimum Q10 for ONT reads, fastp with default settings for Illumina reads. These reads were used both to generate the high-accuracy reference assemblies and as the source for the subsampled read sets used in benchmarking.</p><p dir="ltr">See github.com/rrwick/Autocycler-paper for more details.</p>

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High-throughput bacterial genome assemblies with perfect accuracy

Australian Research Council

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