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Classifying unknown repeat families in the Northern krill genome using Terrier

This takes the Unknown sequences in the repeat library for Northern krill and classifies them using Terrier at thresholds of 0.7 and 0.9.

See more information in this paper:
Unneberg, P., Larsson, M., Olsson, A. et al. Ecological genomics in the Northern krill uncovers loci for local adaptation across ocean basins. Nat Commun 15, 6297 (2024). https://doi.org/10.1038/s41467-024-50239-7


Derived from:
Wallberg, Andreas; Unneberg, Per (2024). 3. Ecological genomics of the Northern krill: Genome assembly annotations (genes and repeats). Uppsala University. Dataset. https://doi.org/10.17044/scilifelab.22786925.v1

Funding

Improving disease resilience in ecosystems using synthetic biology

Australian Research Council

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Increasing amphibian immunity to combat disease causing mass extinction

Australian Research Council

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