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GCF_000240185.1_ASM24018v2_genomic_0.0001snps.vcf (21.54 kB)
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GCF_000013425.1_ASM1342v1_genomic_0.0001snps.vcf (10.89 kB)
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GCF_000013425.1_ASM1342v1_genomic_0.001snps.vcf (101.7 kB)
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GCF_009734005.1_ASM973400v2_genomic_MultiVar.vcf (254.34 kB)
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GCF_009734005.1_ASM973400v2_genomic_0.1snps.fa (2.82 MB)
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GCF_000013425.1_ASM1342v1_genomic_0.1snps.vcf (8.95 MB)
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GCF_000240185.1_ASM24018v2_genomic_MultiVar.vcf (494.93 kB)
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GCF_000005845.2_ASM584v2_genomic_0.1snps.vcf (14.8 MB)
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GCF_000005845.2_ASM584v2_genomic_0.001snps.fa (4.48 MB)
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GCF_000240185.1_ASM24018v2_genomic_0.1snps.fa (5.49 MB)
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GCF_000005845.2_ASM584v2_genomic_0.001snps.vcf (167.22 kB)
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GCF_000013425.1_ASM1342v1_genomic_0.001snps.fa (2.72 MB)
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GCF_009734005.1_ASM973400v2_genomic_0.001snps.vcf (110.62 kB)
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GCF_009734005.1_ASM973400v2_genomic_0.01snps.fa (2.82 MB)
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GCF_009734005.1_ASM973400v2_genomic_0.0001snps.fa (2.82 MB)
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GCF_000005845.2_ASM584v2_genomic_0.01snps.vcf (1.61 MB)
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GCF_009734005.1_ASM973400v2_genomic_0.1snps.vcf (9.76 MB)
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GCF_000013425.1_ASM1342v1_genomic_0.01snps.vcf (998.91 kB)
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GCF_000005845.2_ASM584v2_genomic_0.0001snps.fa (4.48 MB)
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GCF_000005845.2_ASM584v2_genomic_0.1snps.fa (4.48 MB)
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SKAOptimisation_Simulated_Mutation_MutatedGenomes
Reference genomes that were synthetically mutated in FASTA format. As well as VCF files containing the location of introduced mutations. Sequencing reads were simulated from mutated genomes. Raw data was used for publication titled:
Rapid, reference-free identification of bacterial pathogen transmission using an optimized split k-mer analysis pipeline
